Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 AC097637.2-201ENST00000624096 1997 ntBASIC17.22■□□□□ 0.35
C9orf72Q96LT7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.22■□□□□ 0.35
C9orf72Q96LT7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 AC008608.2-201ENST00000606089 416 ntBASIC17.22■□□□□ 0.35
C9orf72Q96LT7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 TP73-AS1-207ENST00000624167 988 ntBASIC17.22■□□□□ 0.35
C9orf72Q96LT7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 MTHFR-217ENST00000641820 1569 ntBASIC17.22■□□□□ 0.35
C9orf72Q96LT7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.22■□□□□ 0.35
C9orf72Q96LT7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 AL021920.2-201ENST00000624828 1351 ntBASIC17.21■□□□□ 0.35
C9orf72Q96LT7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 AL020989.1-201ENST00000422979 469 ntBASIC17.21■□□□□ 0.35
C9orf72Q96LT7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 FAM197Y8-203ENST00000450145 560 ntBASIC17.21■□□□□ 0.35
C9orf72Q96LT7 HLA-J-202ENST00000469281 1241 ntBASIC17.21■□□□□ 0.35
C9orf72Q96LT7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C9orf72Q96LT7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.21■□□□□ 0.34
C9orf72Q96LT7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
C9orf72Q96LT7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
C9orf72Q96LT7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.34
C9orf72Q96LT7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf72Q96LT7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
C9orf72Q96LT7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.2■□□□□ 0.34
C9orf72Q96LT7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf72Q96LT7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf72Q96LT7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf72Q96LT7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
C9orf72Q96LT7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.2■□□□□ 0.34
C9orf72Q96LT7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf72Q96LT7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C9orf72Q96LT7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms