Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00615Q96LM1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00615Q96LM1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LINC00615Q96LM1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00615Q96LM1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 AL627223.1-201ENST00000416693 442 ntBASIC16.16■□□□□ 0.18
LINC00615Q96LM1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 AC093520.2-201ENST00000561830 333 ntBASIC16.16■□□□□ 0.18
LINC00615Q96LM1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00615Q96LM1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00615Q96LM1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.14■□□□□ 0.18
LINC00615Q96LM1 FOXO1B-201ENST00000504678 1527 ntBASIC16.14■□□□□ 0.18
LINC00615Q96LM1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 AC023141.5-201ENST00000458585 616 ntBASIC16.14■□□□□ 0.17
LINC00615Q96LM1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00615Q96LM1 AL596442.2-201ENST00000610240 980 ntBASIC16.14■□□□□ 0.17
LINC00615Q96LM1 AC009093.7-201ENST00000623853 1223 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms