Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.83■□□□□ 0.6
CDK5RAP3Q96JB5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5RAP3Q96JB5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5RAP3Q96JB5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5RAP3Q96JB5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 HCG4B-203ENST00000450128 991 ntBASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 AC034105.1-201ENST00000563488 319 ntBASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP3Q96JB5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 IGLL3P-201ENST00000412472 434 ntBASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 AL671710.1-201ENST00000610245 2349 ntBASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP3Q96JB5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 AC007967.2-201ENST00000432613 625 ntBASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 MIR4515-201ENST00000584082 81 ntBASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 AC064836.3-201ENST00000607928 673 ntBASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 AC010507.1-201ENST00000633895 436 ntBASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 KRT8P39-201ENST00000396270 1433 ntBASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP3Q96JB5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP3Q96JB5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.79■□□□□ 0.6
CDK5RAP3Q96JB5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP3Q96JB5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.79■□□□□ 0.6
CDK5RAP3Q96JB5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP3Q96JB5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms