Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF31Q96EP0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF31Q96EP0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF31Q96EP0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF31Q96EP0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF31Q96EP0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF31Q96EP0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF31Q96EP0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RNF31Q96EP0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
RNF31Q96EP0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF31Q96EP0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF31Q96EP0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF31Q96EP0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF31Q96EP0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF31Q96EP0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF31Q96EP0 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.1■□□□□ 0.17
RNF31Q96EP0 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.1■□□□□ 0.17
RNF31Q96EP0 AC005237.2-201ENST00000434368 219 ntBASIC16.1■□□□□ 0.17
RNF31Q96EP0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 AP000344.2-201ENST00000512987 629 ntBASIC16.1■□□□□ 0.17
RNF31Q96EP0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF31Q96EP0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF31Q96EP0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF31Q96EP0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF31Q96EP0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF31Q96EP0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF31Q96EP0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF31Q96EP0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF31Q96EP0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 SLC25A1P3-201ENST00000395415 828 ntBASIC16.09■□□□□ 0.17
RNF31Q96EP0 HMGA1P7-201ENST00000406908 502 ntBASIC16.09■□□□□ 0.17
RNF31Q96EP0 AL355306.1-201ENST00000415580 579 ntBASIC16.09■□□□□ 0.17
RNF31Q96EP0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 ADH5P3-201ENST00000433842 1137 ntBASIC16.09■□□□□ 0.17
RNF31Q96EP0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 AC112191.1-201ENST00000523689 701 ntBASIC16.09■□□□□ 0.17
RNF31Q96EP0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 LINC00628-201ENST00000628516 1289 ntBASIC16.09■□□□□ 0.17
RNF31Q96EP0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
RNF31Q96EP0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF31Q96EP0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms