Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 AP000550.4-202ENST00000639755 178 ntBASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 AF228730.7-201ENST00000641842 219 ntBASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 SLC22A20-204ENST00000530038 1673 ntBASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 AP005117.1-202ENST00000581724 1908 ntBASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 AL356309.3-201ENST00000624132 1934 ntBASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 ATP5G2P1-201ENST00000433580 426 ntBASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 CYP2A7P1-201ENST00000595391 815 ntBASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 AC010654.1-201ENST00000615722 808 ntBASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC44A1Q8WWI5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
SLC44A1Q8WWI5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
SLC44A1Q8WWI5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.71■□□□□ 0.26
SLC44A1Q8WWI5 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
SLC44A1Q8WWI5 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SLC44A1Q8WWI5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 RBM17P3-201ENST00000417687 1192 ntBASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 PMS2P1-201ENST00000431037 1228 ntBASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 AC138894.3-201ENST00000603787 634 ntBASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 AC069148.1-201ENST00000608741 768 ntBASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 AC091076.1-201ENST00000610741 619 ntBASIC16.7■□□□□ 0.26
SLC44A1Q8WWI5 AC092119.3-201ENST00000612618 583 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms