Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM11BQ8TCY0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 AL135905.2-201ENST00000584934 1404 ntBASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 AC111152.3-201ENST00000569699 673 ntBASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
SMIM11BQ8TCY0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 CDC14C-201ENST00000428251 1719 ntBASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms