Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.19■□□□□ 0.18
RNF217Q8TC41 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
RNF217Q8TC41 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF217Q8TC41 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF217Q8TC41 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF217Q8TC41 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RNF217Q8TC41 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF217Q8TC41 GRK6P1-201ENST00000400595 1711 ntBASIC16.19■□□□□ 0.18
RNF217Q8TC41 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF217Q8TC41 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF217Q8TC41 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF217Q8TC41 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 RN7SL850P-201ENST00000579959 291 ntBASIC16.18■□□□□ 0.18
RNF217Q8TC41 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.18■□□□□ 0.18
RNF217Q8TC41 AC244517.3-201ENST00000616254 1235 ntBASIC16.18■□□□□ 0.18
RNF217Q8TC41 AL589935.2-201ENST00000616471 1231 ntBASIC16.18■□□□□ 0.18
RNF217Q8TC41 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF217Q8TC41 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF217Q8TC41 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 AL671277.2-201ENST00000458060 996 ntBASIC16.17■□□□□ 0.18
RNF217Q8TC41 AC120057.1-201ENST00000483947 663 ntBASIC16.17■□□□□ 0.18
RNF217Q8TC41 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 RNF126P1-202ENST00000569893 925 ntBASIC16.17■□□□□ 0.18
RNF217Q8TC41 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.17■□□□□ 0.18
RNF217Q8TC41 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RNF217Q8TC41 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF217Q8TC41 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF217Q8TC41 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF217Q8TC41 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF217Q8TC41 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms