Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 AL512652.2-201ENST00000625156 1716 ntBASIC17.36■□□□□ 0.37
RFX6Q8HWS3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 CYP2A7P1-201ENST00000595391 815 ntBASIC17.36■□□□□ 0.37
RFX6Q8HWS3 AL691432.3-201ENST00000621860 400 ntBASIC17.36■□□□□ 0.37
RFX6Q8HWS3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 ME2P1-201ENST00000426028 1970 ntBASIC17.36■□□□□ 0.37
RFX6Q8HWS3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 KRT8P39-201ENST00000396270 1433 ntBASIC17.36■□□□□ 0.37
RFX6Q8HWS3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX6Q8HWS3 GGT3P-204ENST00000453783 1664 ntBASIC17.36■□□□□ 0.37
RFX6Q8HWS3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 RPS2P28-201ENST00000314255 741 ntBASIC17.35■□□□□ 0.37
RFX6Q8HWS3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 IGHV3-65-201ENST00000523210 341 ntBASIC17.35■□□□□ 0.37
RFX6Q8HWS3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 RN7SL510P-201ENST00000581311 263 ntBASIC17.35■□□□□ 0.37
RFX6Q8HWS3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RFX6Q8HWS3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms