Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 BCRP6-201ENST00000510112 632 ntBASIC20.6■□□□□ 0.89
COL23A1Q86Y22 BCRP7-201ENST00000511549 544 ntBASIC20.6■□□□□ 0.89
COL23A1Q86Y22 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 AL391069.4-201ENST00000609583 481 ntBASIC20.6■□□□□ 0.89
COL23A1Q86Y22 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL23A1Q86Y22 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 AC004408.2-201ENST00000623613 2777 ntBASIC20.59■□□□□ 0.89
COL23A1Q86Y22 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 HIST3H2BA-201ENST00000436555 524 ntBASIC20.59■□□□□ 0.89
COL23A1Q86Y22 AL139010.1-201ENST00000454878 894 ntBASIC20.59■□□□□ 0.89
COL23A1Q86Y22 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 TDH-203ENST00000531764 1110 ntBASIC20.59■□□□□ 0.89
COL23A1Q86Y22 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 CU634019.7-201ENST00000624153 1185 ntBASIC20.59■□□□□ 0.89
COL23A1Q86Y22 FP236241.2-201ENST00000624906 1185 ntBASIC20.59■□□□□ 0.89
COL23A1Q86Y22 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
COL23A1Q86Y22 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 PFN1P12-201ENST00000455938 534 ntBASIC20.58■□□□□ 0.89
COL23A1Q86Y22 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 AC243960.2-201ENST00000600996 747 ntBASIC20.58■□□□□ 0.89
COL23A1Q86Y22 AC020765.3-201ENST00000613051 740 ntBASIC20.58■□□□□ 0.89
COL23A1Q86Y22 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
COL23A1Q86Y22 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL23A1Q86Y22 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
COL23A1Q86Y22 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL23A1Q86Y22 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL23A1Q86Y22 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL23A1Q86Y22 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL23A1Q86Y22 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL23A1Q86Y22 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
COL23A1Q86Y22 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 RNA5SP423-201ENST00000517127 109 ntBASIC20.57■□□□□ 0.88
COL23A1Q86Y22 C2orf69P2-201ENST00000562032 1123 ntBASIC20.57■□□□□ 0.88
COL23A1Q86Y22 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC20.57■□□□□ 0.88
COL23A1Q86Y22 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms