Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF546Q86UE3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 C2orf69P3-201ENST00000565542 1120 ntBASIC13.9□□□□□ -0.18
ZNF546Q86UE3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 AC002310.6-201ENST00000624451 1377 ntBASIC13.9□□□□□ -0.18
ZNF546Q86UE3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF546Q86UE3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
ZNF546Q86UE3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
ZNF546Q86UE3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.9□□□□□ -0.19
ZNF546Q86UE3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
ZNF546Q86UE3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.9□□□□□ -0.19
ZNF546Q86UE3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
ZNF546Q86UE3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 AC007663.1-201ENST00000438948 1240 ntBASIC13.89□□□□□ -0.19
ZNF546Q86UE3 UBE2SP1-201ENST00000450587 669 ntBASIC13.89□□□□□ -0.19
ZNF546Q86UE3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 IGHV3-52-201ENST00000519770 353 ntBASIC13.89□□□□□ -0.19
ZNF546Q86UE3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 AP003071.4-201ENST00000562276 1284 ntBASIC13.89□□□□□ -0.19
ZNF546Q86UE3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 ITM2C-210ENST00000620962 501 ntBASIC13.89□□□□□ -0.19
ZNF546Q86UE3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZNF546Q86UE3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms