Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.91■□□□□ 0.78
RNF20Q5VTR2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 AL645728.2-201ENST00000641974 660 ntBASIC19.9■□□□□ 0.78
RNF20Q5VTR2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 GPAA1P2-202ENST00000606848 1787 ntBASIC19.9■□□□□ 0.78
RNF20Q5VTR2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
RNF20Q5VTR2 CYP2T1P-202ENST00000641596 2535 ntBASIC19.9■□□□□ 0.78
RNF20Q5VTR2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.89■□□□□ 0.78
RNF20Q5VTR2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RNF20Q5VTR2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.89■□□□□ 0.77
RNF20Q5VTR2 AL513480.1-201ENST00000451731 511 ntBASIC19.89■□□□□ 0.77
RNF20Q5VTR2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 AC079776.4-201ENST00000511039 504 ntBASIC19.89■□□□□ 0.77
RNF20Q5VTR2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 Z83851.2-201ENST00000609564 659 ntBASIC19.89■□□□□ 0.77
RNF20Q5VTR2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 AL662844.4-201ENST00000606367 2838 ntBASIC19.89■□□□□ 0.77
RNF20Q5VTR2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF20Q5VTR2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms