Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRFAM7AQ494W8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRFAM7AQ494W8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRFAM7AQ494W8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 LAGE3P1-201ENST00000425356 484 ntBASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRFAM7AQ494W8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 AC092053.1-201ENST00000605787 1936 ntBASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 MTCL1P1-201ENST00000446207 792 ntBASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 AC002558.1-201ENST00000488906 803 ntBASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 AC005829.1-201ENST00000570002 483 ntBASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRFAM7AQ494W8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.65□□□□□ -0.07
CHRFAM7AQ494W8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRFAM7AQ494W8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
CHRFAM7AQ494W8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRFAM7AQ494W8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms