Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.71■□□□□ 0.43
ERCC6LQ2NKX8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.71■□□□□ 0.42
ERCC6LQ2NKX8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.71■□□□□ 0.42
ERCC6LQ2NKX8 AC016027.1-202ENST00000607927 1699 ntBASIC17.71■□□□□ 0.42
ERCC6LQ2NKX8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ERCC6LQ2NKX8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.71■□□□□ 0.42
ERCC6LQ2NKX8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ERCC6LQ2NKX8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 REXO1L8P-201ENST00000604378 1897 ntBASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 STK25P1-201ENST00000585406 838 ntBASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 KRT17P2-201ENST00000300992 1314 ntBASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC6LQ2NKX8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 TSPY7P-201ENST00000431358 1114 ntBASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 SNORA78-201ENST00000459373 127 ntBASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 AC097637.2-201ENST00000624096 1997 ntBASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC6LQ2NKX8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC6LQ2NKX8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms