Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 KRT19P2-202ENST00000557173 1012 ntBASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 AL009183.1-201ENST00000603760 355 ntBASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 AC021097.1-201ENST00000607902 574 ntBASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 AC007064.4-201ENST00000637740 555 ntBASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 BCAR1-209ENST00000546196 1340 ntBASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO1Q2MKA7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 AC140658.5-201ENST00000438532 169 ntBASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 AC109635.5-201ENST00000533593 962 ntBASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 AC005622.1-201ENST00000636801 1703 ntBASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 AC006449.6-201ENST00000612330 2296 ntBASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.38□□□□□ -0.11
RSPO1Q2MKA7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO1Q2MKA7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms