Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL20P78556 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 AC007292.2-201ENST00000593524 1812 ntBASIC13.16□□□□□ -0.3
CCL20P78556 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCL20P78556 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL20P78556 AL049757.1-201ENST00000616842 1596 ntBASIC13.15□□□□□ -0.3
CCL20P78556 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL20P78556 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL20P78556 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCL20P78556 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CCL20P78556 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL20P78556 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL20P78556 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCL20P78556 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL20P78556 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL20P78556 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCL20P78556 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
CCL20P78556 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL20P78556 AL671710.1-201ENST00000610245 2349 ntBASIC13.15□□□□□ -0.3
CCL20P78556 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCL20P78556 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL20P78556 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL20P78556 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCL20P78556 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCL20P78556 AC069224.1-201ENST00000566372 1715 ntBASIC13.15□□□□□ -0.3
CCL20P78556 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL20P78556 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCL20P78556 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL20P78556 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL20P78556 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCL20P78556 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.15□□□□□ -0.31
CCL20P78556 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
CCL20P78556 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCL20P78556 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL20P78556 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CCL20P78556 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CCL20P78556 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CCL20P78556 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CCL20P78556 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CCL20P78556 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL20P78556 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.14□□□□□ -0.31
CCL20P78556 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL20P78556 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL20P78556 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CCL20P78556 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CCL20P78556 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL20P78556 UBE2SP1-201ENST00000450587 669 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms