Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NKX6-1P78426 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.74□□□□□ -0.05
NKX6-1P78426 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.74□□□□□ -0.05
NKX6-1P78426 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX6-1P78426 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NKX6-1P78426 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX6-1P78426 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NKX6-1P78426 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX6-1P78426 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
NKX6-1P78426 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX6-1P78426 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX6-1P78426 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 AC025580.3-201ENST00000617932 1424 ntBASIC14.74□□□□□ -0.05
NKX6-1P78426 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-1P78426 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NKX6-1P78426 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX6-1P78426 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
NKX6-1P78426 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX6-1P78426 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX6-1P78426 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NKX6-1P78426 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
NKX6-1P78426 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NKX6-1P78426 CROCCP2-202ENST00000412962 2773 ntBASIC14.73□□□□□ -0.05
NKX6-1P78426 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX6-1P78426 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX6-1P78426 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.73□□□□□ -0.05
NKX6-1P78426 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.73□□□□□ -0.05
NKX6-1P78426 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.73□□□□□ -0.05
NKX6-1P78426 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX6-1P78426 AC023141.13-201ENST00000604991 943 ntBASIC14.73□□□□□ -0.05
NKX6-1P78426 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX6-1P78426 AC091812.2-201ENST00000619081 385 ntBASIC14.73□□□□□ -0.05
NKX6-1P78426 AL118508.1-201ENST00000613502 2345 ntBASIC14.73□□□□□ -0.05
NKX6-1P78426 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.73□□□□□ -0.05
NKX6-1P78426 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
NKX6-1P78426 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX6-1P78426 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.73□□□□□ -0.05
NKX6-1P78426 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
NKX6-1P78426 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX6-1P78426 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-1P78426 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.73□□□□□ -0.05
NKX6-1P78426 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
NKX6-1P78426 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX6-1P78426 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX6-1P78426 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX6-1P78426 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX6-1P78426 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NKX6-1P78426 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 RHOQP3-201ENST00000437982 621 ntBASIC14.72□□□□□ -0.05
NKX6-1P78426 AC087163.2-201ENST00000457299 853 ntBASIC14.72□□□□□ -0.05
NKX6-1P78426 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX6-1P78426 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.72□□□□□ -0.05
NKX6-1P78426 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.72□□□□□ -0.05
NKX6-1P78426 AC138761.1-201ENST00000584393 385 ntBASIC14.72□□□□□ -0.05
NKX6-1P78426 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX6-1P78426 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms