Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.75■■□□□ 1.07
RIPK4P57078 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC21.75■■□□□ 1.07
RIPK4P57078 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.75■■□□□ 1.07
RIPK4P57078 AC008267.7-201ENST00000624570 1194 ntBASIC21.75■■□□□ 1.07
RIPK4P57078 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK4P57078 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK4P57078 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.75■■□□□ 1.07
RIPK4P57078 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RIPK4P57078 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK4P57078 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK4P57078 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK4P57078 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC21.75■■□□□ 1.07
RIPK4P57078 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIPK4P57078 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.74■■□□□ 1.07
RIPK4P57078 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK4P57078 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RIPK4P57078 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK4P57078 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK4P57078 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK4P57078 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK4P57078 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK4P57078 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RIPK4P57078 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.74■■□□□ 1.07
RIPK4P57078 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK4P57078 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.74■■□□□ 1.07
RIPK4P57078 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.74■■□□□ 1.07
RIPK4P57078 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.74■■□□□ 1.07
RIPK4P57078 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.74■■□□□ 1.07
RIPK4P57078 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK4P57078 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK4P57078 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK4P57078 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.74■■□□□ 1.07
RIPK4P57078 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK4P57078 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RIPK4P57078 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC21.74■■□□□ 1.07
RIPK4P57078 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIPK4P57078 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC21.74■■□□□ 1.07
RIPK4P57078 AL139384.1-201ENST00000612143 3047 ntBASIC21.74■■□□□ 1.07
RIPK4P57078 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK4P57078 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
RIPK4P57078 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK4P57078 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK4P57078 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK4P57078 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RIPK4P57078 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC21.73■■□□□ 1.07
RIPK4P57078 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.73■■□□□ 1.07
RIPK4P57078 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK4P57078 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
RIPK4P57078 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK4P57078 AL139400.1-201ENST00000366220 510 ntBASIC21.73■■□□□ 1.07
RIPK4P57078 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.73■■□□□ 1.07
RIPK4P57078 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK4P57078 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.73■■□□□ 1.07
RIPK4P57078 IGHV3-62-201ENST00000520057 340 ntBASIC21.73■■□□□ 1.07
RIPK4P57078 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
RIPK4P57078 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
RIPK4P57078 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK4P57078 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK4P57078 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RIPK4P57078 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC21.73■■□□□ 1.07
RIPK4P57078 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIPK4P57078 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK4P57078 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK4P57078 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK4P57078 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK4P57078 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC21.72■■□□□ 1.07
RIPK4P57078 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK4P57078 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.72■■□□□ 1.07
RIPK4P57078 UXT-AS1-201ENST00000590504 1525 ntBASIC21.72■■□□□ 1.07
RIPK4P57078 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK4P57078 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK4P57078 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK4P57078 MIR346-201ENST00000362234 95 ntBASIC21.72■■□□□ 1.07
RIPK4P57078 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.72■■□□□ 1.07
RIPK4P57078 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.72■■□□□ 1.07
RIPK4P57078 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.72■■□□□ 1.07
RIPK4P57078 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
RIPK4P57078 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
RIPK4P57078 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK4P57078 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK4P57078 AC023141.5-201ENST00000458585 616 ntBASIC21.72■■□□□ 1.07
RIPK4P57078 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.72■■□□□ 1.07
RIPK4P57078 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK4P57078 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RIPK4P57078 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK4P57078 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RIPK4P57078 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
RIPK4P57078 KRT8P23-201ENST00000560090 1207 ntBASIC21.72■■□□□ 1.07
RIPK4P57078 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.72■■□□□ 1.07
RIPK4P57078 KRT18P28-201ENST00000453838 1332 ntBASIC21.72■■□□□ 1.07
RIPK4P57078 GGT3P-204ENST00000453783 1664 ntBASIC21.72■■□□□ 1.07
RIPK4P57078 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK4P57078 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIPK4P57078 AC009053.2-201ENST00000563701 2365 ntBASIC21.72■■□□□ 1.07
RIPK4P57078 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.72■■□□□ 1.07
RIPK4P57078 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK4P57078 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.71■■□□□ 1.07
RIPK4P57078 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC21.71■■□□□ 1.07
RIPK4P57078 AC073439.1-201ENST00000624121 1774 ntBASIC21.71■■□□□ 1.07
RIPK4P57078 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms