Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NR1H2P55055 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.88■□□□□ 0.13
NR1H2P55055 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.88■□□□□ 0.13
NR1H2P55055 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.88■□□□□ 0.13
NR1H2P55055 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
NR1H2P55055 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.88■□□□□ 0.13
NR1H2P55055 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NR1H2P55055 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.88■□□□□ 0.13
NR1H2P55055 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NR1H2P55055 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NR1H2P55055 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.88■□□□□ 0.13
NR1H2P55055 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.88■□□□□ 0.13
NR1H2P55055 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.88■□□□□ 0.13
NR1H2P55055 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.88■□□□□ 0.13
NR1H2P55055 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NR1H2P55055 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NR1H2P55055 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.87■□□□□ 0.13
NR1H2P55055 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.87■□□□□ 0.13
NR1H2P55055 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NR1H2P55055 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.87■□□□□ 0.13
NR1H2P55055 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.87■□□□□ 0.13
NR1H2P55055 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NR1H2P55055 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.87■□□□□ 0.13
NR1H2P55055 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 TSPY19P-201ENST00000418461 509 ntBASIC15.87■□□□□ 0.13
NR1H2P55055 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.87■□□□□ 0.13
NR1H2P55055 TSPY18P-201ENST00000441642 509 ntBASIC15.87■□□□□ 0.13
NR1H2P55055 UNC93B7-201ENST00000509439 705 ntBASIC15.87■□□□□ 0.13
NR1H2P55055 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.87■□□□□ 0.13
NR1H2P55055 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.87■□□□□ 0.13
NR1H2P55055 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.87■□□□□ 0.13
NR1H2P55055 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NR1H2P55055 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NR1H2P55055 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.87■□□□□ 0.13
NR1H2P55055 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
NR1H2P55055 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
NR1H2P55055 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
NR1H2P55055 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.87■□□□□ 0.13
NR1H2P55055 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
NR1H2P55055 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NR1H2P55055 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NR1H2P55055 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.86■□□□□ 0.13
NR1H2P55055 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.86■□□□□ 0.13
NR1H2P55055 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
NR1H2P55055 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.86■□□□□ 0.13
NR1H2P55055 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.86■□□□□ 0.13
NR1H2P55055 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NR1H2P55055 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.86■□□□□ 0.13
NR1H2P55055 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.86■□□□□ 0.13
NR1H2P55055 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.86■□□□□ 0.13
NR1H2P55055 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.86■□□□□ 0.13
NR1H2P55055 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
NR1H2P55055 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NR1H2P55055 AC005104.2-201ENST00000427818 678 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms