Protein–RNA interactions for Protein: P46531

NOTCH1, Neurogenic locus notch homolog protein 1, humanhuman

Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1P46531 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
NOTCH1P46531 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NOTCH1P46531 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
NOTCH1P46531 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
NOTCH1P46531 AC098818.2-201ENST00000564925 2320 ntBASIC12.24□□□□□ -0.45
NOTCH1P46531 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
NOTCH1P46531 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NOTCH1P46531 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NOTCH1P46531 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.24□□□□□ -0.45
NOTCH1P46531 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.24□□□□□ -0.45
NOTCH1P46531 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
NOTCH1P46531 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.24□□□□□ -0.45
NOTCH1P46531 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NOTCH1P46531 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.23□□□□□ -0.45
NOTCH1P46531 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.23□□□□□ -0.45
NOTCH1P46531 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
NOTCH1P46531 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
NOTCH1P46531 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
NOTCH1P46531 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
NOTCH1P46531 AC104457.1-201ENST00000401024 814 ntBASIC12.23□□□□□ -0.45
NOTCH1P46531 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.23□□□□□ -0.45
NOTCH1P46531 SPDYE17-201ENST00000412399 783 ntBASIC12.23□□□□□ -0.45
NOTCH1P46531 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.23□□□□□ -0.45
NOTCH1P46531 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.23□□□□□ -0.45
NOTCH1P46531 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.23□□□□□ -0.45
NOTCH1P46531 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.23□□□□□ -0.45
NOTCH1P46531 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.23□□□□□ -0.45
NOTCH1P46531 AC025048.3-201ENST00000590609 569 ntBASIC12.23□□□□□ -0.45
NOTCH1P46531 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.23□□□□□ -0.45
NOTCH1P46531 AL022328.1-201ENST00000610050 478 ntBASIC12.23□□□□□ -0.45
NOTCH1P46531 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
NOTCH1P46531 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC12.23□□□□□ -0.45
NOTCH1P46531 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
NOTCH1P46531 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
NOTCH1P46531 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.23□□□□□ -0.45
NOTCH1P46531 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.23□□□□□ -0.45
NOTCH1P46531 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.23□□□□□ -0.45
NOTCH1P46531 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC12.23□□□□□ -0.45
NOTCH1P46531 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.23□□□□□ -0.45
NOTCH1P46531 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.23□□□□□ -0.45
NOTCH1P46531 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.23□□□□□ -0.45
NOTCH1P46531 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 AC006033.1-201ENST00000440505 426 ntBASIC12.23□□□□□ -0.45
NOTCH1P46531 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.23□□□□□ -0.45
NOTCH1P46531 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NOTCH1P46531 MIR4706-201ENST00000582134 82 ntBASIC12.23□□□□□ -0.45
NOTCH1P46531 AL391069.4-201ENST00000609583 481 ntBASIC12.23□□□□□ -0.45
NOTCH1P46531 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC12.22□□□□□ -0.45
NOTCH1P46531 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.22□□□□□ -0.45
NOTCH1P46531 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.22□□□□□ -0.45
NOTCH1P46531 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 KRT8P22-201ENST00000562317 1415 ntBASIC12.22□□□□□ -0.45
NOTCH1P46531 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.22□□□□□ -0.45
NOTCH1P46531 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.22□□□□□ -0.45
NOTCH1P46531 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NOTCH1P46531 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC12.22□□□□□ -0.45
NOTCH1P46531 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NOTCH1P46531 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.22□□□□□ -0.45
NOTCH1P46531 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.22□□□□□ -0.45
NOTCH1P46531 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NOTCH1P46531 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.22□□□□□ -0.45
NOTCH1P46531 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms