Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.9■□□□□ 0.3
GRIA1P42261 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA1P42261 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.9■□□□□ 0.3
GRIA1P42261 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
GRIA1P42261 MTHFR-217ENST00000641820 1569 ntBASIC16.9■□□□□ 0.3
GRIA1P42261 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA1P42261 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA1P42261 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
GRIA1P42261 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.9■□□□□ 0.3
GRIA1P42261 AC007950.2-201ENST00000615045 2347 ntBASIC16.9■□□□□ 0.3
GRIA1P42261 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA1P42261 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA1P42261 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA1P42261 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA1P42261 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.9■□□□□ 0.3
GRIA1P42261 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.9■□□□□ 0.3
GRIA1P42261 AC092910.1-201ENST00000482027 1129 ntBASIC16.9■□□□□ 0.3
GRIA1P42261 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.9■□□□□ 0.3
GRIA1P42261 AP002469.2-201ENST00000531724 424 ntBASIC16.9■□□□□ 0.3
GRIA1P42261 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.9■□□□□ 0.3
GRIA1P42261 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.9■□□□□ 0.3
GRIA1P42261 AC005593.1-201ENST00000624894 515 ntBASIC16.9■□□□□ 0.3
GRIA1P42261 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GRIA1P42261 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA1P42261 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA1P42261 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.9■□□□□ 0.3
GRIA1P42261 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.9■□□□□ 0.3
GRIA1P42261 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.9■□□□□ 0.3
GRIA1P42261 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA1P42261 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.9■□□□□ 0.3
GRIA1P42261 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.9■□□□□ 0.3
GRIA1P42261 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA1P42261 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA1P42261 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.9■□□□□ 0.3
GRIA1P42261 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA1P42261 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
GRIA1P42261 GPAA1P2-202ENST00000606848 1787 ntBASIC16.89■□□□□ 0.3
GRIA1P42261 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.89■□□□□ 0.3
GRIA1P42261 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
GRIA1P42261 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.89■□□□□ 0.29
GRIA1P42261 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 MRPL3P1-201ENST00000400109 1033 ntBASIC16.89■□□□□ 0.29
GRIA1P42261 AL450487.1-201ENST00000426799 995 ntBASIC16.89■□□□□ 0.29
GRIA1P42261 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.89■□□□□ 0.29
GRIA1P42261 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.89■□□□□ 0.29
GRIA1P42261 AC087641.1-201ENST00000557561 1021 ntBASIC16.89■□□□□ 0.29
GRIA1P42261 AC005412.3-201ENST00000580309 715 ntBASIC16.89■□□□□ 0.29
GRIA1P42261 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
GRIA1P42261 ACTL9-202ENST00000612068 1252 ntBASIC16.89■□□□□ 0.29
GRIA1P42261 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.89■□□□□ 0.29
GRIA1P42261 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GRIA1P42261 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.89■□□□□ 0.29
GRIA1P42261 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.89■□□□□ 0.29
GRIA1P42261 AL596087.1-201ENST00000400979 1969 ntBASIC16.89■□□□□ 0.29
GRIA1P42261 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GRIA1P42261 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.89■□□□□ 0.29
GRIA1P42261 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.89■□□□□ 0.29
GRIA1P42261 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
GRIA1P42261 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GRIA1P42261 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GRIA1P42261 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.89■□□□□ 0.29
GRIA1P42261 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GRIA1P42261 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
GRIA1P42261 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.89■□□□□ 0.29
GRIA1P42261 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.88■□□□□ 0.29
GRIA1P42261 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.88■□□□□ 0.29
GRIA1P42261 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
GRIA1P42261 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIA1P42261 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIA1P42261 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIA1P42261 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIA1P42261 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIA1P42261 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIA1P42261 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIA1P42261 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIA1P42261 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.88■□□□□ 0.29
GRIA1P42261 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.88■□□□□ 0.29
GRIA1P42261 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIA1P42261 MRPL20P1-201ENST00000400819 433 ntBASIC16.88■□□□□ 0.29
GRIA1P42261 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GRIA1P42261 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GRIA1P42261 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.88■□□□□ 0.29
GRIA1P42261 RNA5SP419-201ENST00000515908 135 ntBASIC16.88■□□□□ 0.29
GRIA1P42261 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.88■□□□□ 0.29
GRIA1P42261 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.88■□□□□ 0.29
GRIA1P42261 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms