Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.06■□□□□ 0.32
SLC6A4P31645 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC6A4P31645 GPAA1P2-202ENST00000606848 1787 ntBASIC17.06■□□□□ 0.32
SLC6A4P31645 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SLC6A4P31645 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.06■□□□□ 0.32
SLC6A4P31645 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC6A4P31645 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLC6A4P31645 FOXO1B-201ENST00000504678 1527 ntBASIC17.06■□□□□ 0.32
SLC6A4P31645 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SLC6A4P31645 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A4P31645 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A4P31645 AC073439.1-201ENST00000624121 1774 ntBASIC17.05■□□□□ 0.32
SLC6A4P31645 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC6A4P31645 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A4P31645 FLJ38576-201ENST00000623820 2459 ntBASIC17.05■□□□□ 0.32
SLC6A4P31645 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.05■□□□□ 0.32
SLC6A4P31645 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC6A4P31645 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC6A4P31645 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC6A4P31645 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLC6A4P31645 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC6A4P31645 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A4P31645 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A4P31645 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC6A4P31645 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLC6A4P31645 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SLC6A4P31645 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A4P31645 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLC6A4P31645 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC6A4P31645 AC142381.1-201ENST00000426099 345 ntBASIC17.05■□□□□ 0.32
SLC6A4P31645 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC6A4P31645 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A4P31645 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A4P31645 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A4P31645 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.05■□□□□ 0.32
SLC6A4P31645 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC6A4P31645 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC6A4P31645 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC6A4P31645 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC6A4P31645 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLC6A4P31645 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
SLC6A4P31645 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A4P31645 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC6A4P31645 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.05■□□□□ 0.32
SLC6A4P31645 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A4P31645 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A4P31645 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A4P31645 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC6A4P31645 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC6A4P31645 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLC6A4P31645 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 AC092171.3-201ENST00000610122 2651 ntBASIC17.04■□□□□ 0.32
SLC6A4P31645 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC6A4P31645 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC6A4P31645 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC6A4P31645 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC6A4P31645 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC6A4P31645 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SLC6A4P31645 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 AGGF1P2-201ENST00000426656 2106 ntBASIC17.04■□□□□ 0.32
SLC6A4P31645 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC6A4P31645 RBPMS2P1-201ENST00000437762 623 ntBASIC17.04■□□□□ 0.32
SLC6A4P31645 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC6A4P31645 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC6A4P31645 PRYP6-201ENST00000514804 343 ntBASIC17.04■□□□□ 0.32
SLC6A4P31645 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC6A4P31645 AC004449.1-201ENST00000564240 433 ntBASIC17.04■□□□□ 0.32
SLC6A4P31645 AC073389.1-201ENST00000595595 795 ntBASIC17.04■□□□□ 0.32
SLC6A4P31645 AC011676.5-201ENST00000624864 2660 ntBASIC17.04■□□□□ 0.32
SLC6A4P31645 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC6A4P31645 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC6A4P31645 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLC6A4P31645 AD000864.1-201ENST00000624076 2295 ntBASIC17.04■□□□□ 0.32
SLC6A4P31645 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A4P31645 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A4P31645 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A4P31645 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms