Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
GDF1P27539 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.1■□□□□ 0.01
GDF1P27539 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.1■□□□□ 0.01
GDF1P27539 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
GDF1P27539 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 SPCS2P4-201ENST00000436160 681 ntBASIC15.1■□□□□ 0.01
GDF1P27539 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.1■□□□□ 0.01
GDF1P27539 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.1■□□□□ 0.01
GDF1P27539 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.1■□□□□ 0.01
GDF1P27539 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
GDF1P27539 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.1■□□□□ 0.01
GDF1P27539 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.1■□□□□ 0.01
GDF1P27539 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GDF1P27539 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.09■□□□□ 0.01
GDF1P27539 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.09■□□□□ 0.01
GDF1P27539 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.09■□□□□ 0.01
GDF1P27539 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.09■□□□□ 0.01
GDF1P27539 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GDF1P27539 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
GDF1P27539 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.09■□□□□ 0.01
GDF1P27539 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.09■□□□□ 0.01
GDF1P27539 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 AC093028.1-201ENST00000622998 982 ntBASIC15.09■□□□□ 0.01
GDF1P27539 AC009093.7-201ENST00000623853 1223 ntBASIC15.09■□□□□ 0.01
GDF1P27539 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GDF1P27539 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
GDF1P27539 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.09■□□□□ 0.01
GDF1P27539 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.09■□□□□ 0.01
GDF1P27539 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GDF1P27539 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.09■□□□□ 0.01
GDF1P27539 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GDF1P27539 AC005915.1-201ENST00000624912 2018 ntBASIC15.09■□□□□ 0.01
GDF1P27539 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GDF1P27539 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GDF1P27539 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.08■□□□□ 0.01
GDF1P27539 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GDF1P27539 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
GDF1P27539 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
GDF1P27539 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
GDF1P27539 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
GDF1P27539 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GDF1P27539 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
GDF1P27539 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.08■□□□□ 0
GDF1P27539 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
GDF1P27539 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
GDF1P27539 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.08■□□□□ 0
GDF1P27539 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 AC069335.1-201ENST00000489972 472 ntBASIC15.08■□□□□ 0
GDF1P27539 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
GDF1P27539 AC027796.2-201ENST00000575326 344 ntBASIC15.08■□□□□ 0
GDF1P27539 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.08■□□□□ 0
GDF1P27539 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.08■□□□□ 0
GDF1P27539 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
GDF1P27539 LINC00628-201ENST00000628516 1289 ntBASIC15.08■□□□□ 0
GDF1P27539 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 AL645728.1-201ENST00000366221 2101 ntBASIC15.08■□□□□ 0
GDF1P27539 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms