Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.14□□□□□ -0.15
VAMP1P23763 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.14□□□□□ -0.15
VAMP1P23763 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 AC073347.1-201ENST00000421633 2643 ntBASIC14.14□□□□□ -0.15
VAMP1P23763 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.14□□□□□ -0.15
VAMP1P23763 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VAMP1P23763 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.14□□□□□ -0.15
VAMP1P23763 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VAMP1P23763 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.14□□□□□ -0.15
VAMP1P23763 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.14□□□□□ -0.15
VAMP1P23763 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VAMP1P23763 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 AL135999.2-201ENST00000622438 1686 ntBASIC14.14□□□□□ -0.15
VAMP1P23763 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.14□□□□□ -0.15
VAMP1P23763 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.13□□□□□ -0.15
VAMP1P23763 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.13□□□□□ -0.15
VAMP1P23763 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
VAMP1P23763 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VAMP1P23763 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VAMP1P23763 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VAMP1P23763 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.13□□□□□ -0.15
VAMP1P23763 UBE2SP1-201ENST00000450587 669 ntBASIC14.13□□□□□ -0.15
VAMP1P23763 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 HLA-J-202ENST00000469281 1241 ntBASIC14.13□□□□□ -0.15
VAMP1P23763 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
VAMP1P23763 MIR4651-201ENST00000582622 73 ntBASIC14.13□□□□□ -0.15
VAMP1P23763 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.13□□□□□ -0.15
VAMP1P23763 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.13□□□□□ -0.15
VAMP1P23763 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
VAMP1P23763 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.13□□□□□ -0.15
VAMP1P23763 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.13□□□□□ -0.15
VAMP1P23763 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VAMP1P23763 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VAMP1P23763 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VAMP1P23763 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
VAMP1P23763 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
VAMP1P23763 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.12□□□□□ -0.15
VAMP1P23763 PRAL-201ENST00000624952 3286 ntBASIC14.12□□□□□ -0.15
VAMP1P23763 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VAMP1P23763 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
VAMP1P23763 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
VAMP1P23763 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.12□□□□□ -0.15
VAMP1P23763 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
VAMP1P23763 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VAMP1P23763 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VAMP1P23763 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.12□□□□□ -0.15
VAMP1P23763 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VAMP1P23763 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.12□□□□□ -0.15
VAMP1P23763 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.12□□□□□ -0.15
VAMP1P23763 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.12□□□□□ -0.15
VAMP1P23763 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.12□□□□□ -0.15
VAMP1P23763 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.12□□□□□ -0.15
VAMP1P23763 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.12□□□□□ -0.15
VAMP1P23763 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.12□□□□□ -0.15
VAMP1P23763 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.12□□□□□ -0.15
VAMP1P23763 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VAMP1P23763 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VAMP1P23763 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms