Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TNFSF4P23510 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.28□□□□□ -0.12
TNFSF4P23510 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.28□□□□□ -0.12
TNFSF4P23510 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFSF4P23510 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TNFSF4P23510 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFSF4P23510 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.28□□□□□ -0.12
TNFSF4P23510 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 PGAM5P1-201ENST00000518923 814 ntBASIC14.28□□□□□ -0.12
TNFSF4P23510 AC092865.5-201ENST00000545435 363 ntBASIC14.28□□□□□ -0.12
TNFSF4P23510 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFSF4P23510 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.28□□□□□ -0.12
TNFSF4P23510 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.28□□□□□ -0.12
TNFSF4P23510 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFSF4P23510 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
TNFSF4P23510 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.28□□□□□ -0.12
TNFSF4P23510 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFSF4P23510 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.27□□□□□ -0.12
TNFSF4P23510 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
TNFSF4P23510 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TNFSF4P23510 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TNFSF4P23510 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
TNFSF4P23510 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TNFSF4P23510 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TNFSF4P23510 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TNFSF4P23510 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.27□□□□□ -0.12
TNFSF4P23510 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.27□□□□□ -0.12
TNFSF4P23510 LINC00895-201ENST00000629028 1637 ntBASIC14.27□□□□□ -0.12
TNFSF4P23510 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
TNFSF4P23510 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TNFSF4P23510 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.27□□□□□ -0.12
TNFSF4P23510 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TNFSF4P23510 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.27□□□□□ -0.12
TNFSF4P23510 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TNFSF4P23510 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TNFSF4P23510 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TNFSF4P23510 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TNFSF4P23510 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 AC126755.1-201ENST00000525846 6405 ntBASIC14.27□□□□□ -0.13
TNFSF4P23510 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.27□□□□□ -0.13
TNFSF4P23510 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 AC002056.1-201ENST00000395613 760 ntBASIC14.27□□□□□ -0.13
TNFSF4P23510 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TNFSF4P23510 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.27□□□□□ -0.13
TNFSF4P23510 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.27□□□□□ -0.13
TNFSF4P23510 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.27□□□□□ -0.13
TNFSF4P23510 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.27□□□□□ -0.13
TNFSF4P23510 AC112191.1-201ENST00000523689 701 ntBASIC14.27□□□□□ -0.13
TNFSF4P23510 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.27□□□□□ -0.13
TNFSF4P23510 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.27□□□□□ -0.13
TNFSF4P23510 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.27□□□□□ -0.13
TNFSF4P23510 CYP2A7P1-201ENST00000595391 815 ntBASIC14.27□□□□□ -0.13
TNFSF4P23510 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.27□□□□□ -0.13
TNFSF4P23510 AC013467.2-201ENST00000605472 835 ntBASIC14.27□□□□□ -0.13
TNFSF4P23510 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TNFSF4P23510 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TNFSF4P23510 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.27□□□□□ -0.13
TNFSF4P23510 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TNFSF4P23510 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
TNFSF4P23510 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.27□□□□□ -0.13
TNFSF4P23510 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.27□□□□□ -0.13
TNFSF4P23510 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TNFSF4P23510 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.26□□□□□ -0.13
TNFSF4P23510 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TNFSF4P23510 AC006277.1-201ENST00000624348 1610 ntBASIC14.26□□□□□ -0.13
TNFSF4P23510 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.26□□□□□ -0.13
TNFSF4P23510 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.26□□□□□ -0.13
TNFSF4P23510 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms