Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
ITGA6P23229 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.4■□□□□ 0.86
ITGA6P23229 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.39■□□□□ 0.86
ITGA6P23229 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
ITGA6P23229 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ITGA6P23229 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ITGA6P23229 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
ITGA6P23229 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ITGA6P23229 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.39■□□□□ 0.86
ITGA6P23229 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ITGA6P23229 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ITGA6P23229 AC006538.1-201ENST00000567905 1585 ntBASIC20.39■□□□□ 0.85
ITGA6P23229 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ITGA6P23229 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ITGA6P23229 AL353705.2-201ENST00000428243 662 ntBASIC20.39■□□□□ 0.85
ITGA6P23229 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.39■□□□□ 0.85
ITGA6P23229 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
ITGA6P23229 BANF1P1-201ENST00000553684 263 ntBASIC20.39■□□□□ 0.85
ITGA6P23229 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.39■□□□□ 0.85
ITGA6P23229 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.39■□□□□ 0.85
ITGA6P23229 AC020765.3-201ENST00000613051 740 ntBASIC20.39■□□□□ 0.85
ITGA6P23229 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.39■□□□□ 0.85
ITGA6P23229 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.39■□□□□ 0.85
ITGA6P23229 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
ITGA6P23229 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ITGA6P23229 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ITGA6P23229 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.38■□□□□ 0.85
ITGA6P23229 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.38■□□□□ 0.85
ITGA6P23229 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITGA6P23229 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.38■□□□□ 0.85
ITGA6P23229 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ITGA6P23229 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITGA6P23229 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.38■□□□□ 0.85
ITGA6P23229 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITGA6P23229 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ITGA6P23229 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITGA6P23229 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ITGA6P23229 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITGA6P23229 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ITGA6P23229 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.38■□□□□ 0.85
ITGA6P23229 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITGA6P23229 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITGA6P23229 MRPS18AP1-201ENST00000414458 589 ntBASIC20.38■□□□□ 0.85
ITGA6P23229 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ITGA6P23229 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.38■□□□□ 0.85
ITGA6P23229 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.38■□□□□ 0.85
ITGA6P23229 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.38■□□□□ 0.85
ITGA6P23229 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.38■□□□□ 0.85
ITGA6P23229 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.38■□□□□ 0.85
ITGA6P23229 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.38■□□□□ 0.85
ITGA6P23229 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ITGA6P23229 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.38■□□□□ 0.85
ITGA6P23229 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.38■□□□□ 0.85
ITGA6P23229 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ITGA6P23229 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITGA6P23229 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ITGA6P23229 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.38■□□□□ 0.85
ITGA6P23229 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
ITGA6P23229 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ITGA6P23229 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.38■□□□□ 0.85
ITGA6P23229 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.38■□□□□ 0.85
ITGA6P23229 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ITGA6P23229 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ITGA6P23229 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.37■□□□□ 0.85
ITGA6P23229 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ITGA6P23229 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ITGA6P23229 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.37■□□□□ 0.85
ITGA6P23229 AL035456.1-201ENST00000456064 1369 ntBASIC20.37■□□□□ 0.85
ITGA6P23229 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ITGA6P23229 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.37■□□□□ 0.85
ITGA6P23229 AC012313.1-201ENST00000593393 3059 ntBASIC20.37■□□□□ 0.85
ITGA6P23229 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.37■□□□□ 0.85
ITGA6P23229 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ITGA6P23229 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ITGA6P23229 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.37■□□□□ 0.85
ITGA6P23229 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ITGA6P23229 HLA-V-204ENST00000476601 1289 ntBASIC20.37■□□□□ 0.85
ITGA6P23229 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.37■□□□□ 0.85
ITGA6P23229 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.37■□□□□ 0.85
ITGA6P23229 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.37■□□□□ 0.85
ITGA6P23229 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.37■□□□□ 0.85
ITGA6P23229 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.37■□□□□ 0.85
ITGA6P23229 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.37■□□□□ 0.85
ITGA6P23229 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.37■□□□□ 0.85
ITGA6P23229 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ITGA6P23229 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ITGA6P23229 RNF216P1-203ENST00000404404 2427 ntBASIC20.37■□□□□ 0.85
ITGA6P23229 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.37■□□□□ 0.85
ITGA6P23229 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.36■□□□□ 0.85
ITGA6P23229 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ITGA6P23229 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.36■□□□□ 0.85
ITGA6P23229 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.36■□□□□ 0.85
ITGA6P23229 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ITGA6P23229 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ITGA6P23229 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ITGA6P23229 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ITGA6P23229 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ITGA6P23229 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.36■□□□□ 0.85
ITGA6P23229 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ITGA6P23229 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms