Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.79■□□□□ 0.28
THRAP10827 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
THRAP10827 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THRAP10827 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
THRAP10827 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
THRAP10827 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THRAP10827 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.79■□□□□ 0.28
THRAP10827 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.79■□□□□ 0.28
THRAP10827 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
THRAP10827 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
THRAP10827 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
THRAP10827 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THRAP10827 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
THRAP10827 AC022188.1-201ENST00000620960 1664 ntBASIC16.78■□□□□ 0.28
THRAP10827 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.78■□□□□ 0.28
THRAP10827 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
THRAP10827 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
THRAP10827 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
THRAP10827 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
THRAP10827 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.78■□□□□ 0.28
THRAP10827 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
THRAP10827 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.78■□□□□ 0.28
THRAP10827 AC092183.1-201ENST00000469884 875 ntBASIC16.78■□□□□ 0.28
THRAP10827 AC002558.1-201ENST00000488906 803 ntBASIC16.78■□□□□ 0.28
THRAP10827 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 IGHV3-52-201ENST00000519770 353 ntBASIC16.78■□□□□ 0.28
THRAP10827 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.78■□□□□ 0.28
THRAP10827 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
THRAP10827 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.78■□□□□ 0.28
THRAP10827 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.78■□□□□ 0.28
THRAP10827 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.78■□□□□ 0.28
THRAP10827 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.78■□□□□ 0.28
THRAP10827 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.78■□□□□ 0.28
THRAP10827 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.78■□□□□ 0.28
THRAP10827 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THRAP10827 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.78■□□□□ 0.28
THRAP10827 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
THRAP10827 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
THRAP10827 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
THRAP10827 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.77■□□□□ 0.28
THRAP10827 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
THRAP10827 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.77■□□□□ 0.28
THRAP10827 AC079328.2-201ENST00000561241 3354 ntBASIC16.77■□□□□ 0.28
THRAP10827 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.77■□□□□ 0.28
THRAP10827 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.77■□□□□ 0.28
THRAP10827 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
THRAP10827 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.77■□□□□ 0.28
THRAP10827 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
THRAP10827 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
THRAP10827 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
THRAP10827 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
THRAP10827 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.77■□□□□ 0.28
THRAP10827 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
THRAP10827 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
THRAP10827 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
THRAP10827 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.77■□□□□ 0.28
THRAP10827 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.77■□□□□ 0.28
THRAP10827 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.77■□□□□ 0.28
THRAP10827 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.77■□□□□ 0.28
THRAP10827 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.77■□□□□ 0.28
THRAP10827 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
THRAP10827 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.77■□□□□ 0.28
THRAP10827 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.77■□□□□ 0.28
THRAP10827 STK19B-204ENST00000512515 211 ntBASIC16.77■□□□□ 0.28
THRAP10827 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.77■□□□□ 0.28
THRAP10827 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.77■□□□□ 0.28
THRAP10827 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.77■□□□□ 0.28
THRAP10827 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.77■□□□□ 0.28
THRAP10827 AL691403.2-201ENST00000618460 490 ntBASIC16.77■□□□□ 0.28
THRAP10827 AC055717.3-201ENST00000622967 595 ntBASIC16.77■□□□□ 0.28
THRAP10827 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
THRAP10827 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
THRAP10827 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.77■□□□□ 0.28
THRAP10827 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
THRAP10827 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
THRAP10827 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
THRAP10827 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.77■□□□□ 0.27
THRAP10827 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
THRAP10827 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
THRAP10827 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
THRAP10827 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.77■□□□□ 0.27
THRAP10827 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
THRAP10827 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
THRAP10827 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms