Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SPDYE13P-201ENST00000445314 798 ntBASIC13.89□□□□□ -0.19
CTSDP07339 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CTSDP07339 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
CTSDP07339 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.89□□□□□ -0.19
CTSDP07339 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
CTSDP07339 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.89□□□□□ -0.19
CTSDP07339 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.89□□□□□ -0.19
CTSDP07339 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
CTSDP07339 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CTSDP07339 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.89□□□□□ -0.19
CTSDP07339 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.89□□□□□ -0.19
CTSDP07339 AC144831.1-201ENST00000573312 2656 ntBASIC13.89□□□□□ -0.19
CTSDP07339 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CTSDP07339 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CTSDP07339 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CTSDP07339 DBET-201ENST00000630918 3363 ntBASIC13.89□□□□□ -0.19
CTSDP07339 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CTSDP07339 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.89□□□□□ -0.19
CTSDP07339 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 AC092850.2-201ENST00000623821 2697 ntBASIC13.88□□□□□ -0.19
CTSDP07339 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CTSDP07339 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 PMPCAP1-201ENST00000508114 1576 ntBASIC13.88□□□□□ -0.19
CTSDP07339 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CTSDP07339 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CTSDP07339 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CTSDP07339 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.88□□□□□ -0.19
CTSDP07339 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
CTSDP07339 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CTSDP07339 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CTSDP07339 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CTSDP07339 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 POU5F1P6-201ENST00000466990 990 ntBASIC13.88□□□□□ -0.19
CTSDP07339 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.88□□□□□ -0.19
CTSDP07339 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.88□□□□□ -0.19
CTSDP07339 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.88□□□□□ -0.19
CTSDP07339 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CTSDP07339 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.88□□□□□ -0.19
CTSDP07339 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 AC006011.2-201ENST00000621313 1158 ntBASIC13.88□□□□□ -0.19
CTSDP07339 AC099063.4-201ENST00000641099 1602 ntBASIC13.88□□□□□ -0.19
CTSDP07339 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.88□□□□□ -0.19
CTSDP07339 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.88□□□□□ -0.19
CTSDP07339 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CTSDP07339 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.88□□□□□ -0.19
CTSDP07339 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CTSDP07339 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.88□□□□□ -0.19
CTSDP07339 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.88□□□□□ -0.19
CTSDP07339 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.88□□□□□ -0.19
CTSDP07339 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSDP07339 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CTSDP07339 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CTSDP07339 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms