Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 AC109635.5-201ENST00000533593 962 ntBASIC16.88■□□□□ 0.29
HLA-DQB2P05538 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 AC006449.5-201ENST00000610658 2098 ntBASIC16.87■□□□□ 0.29
HLA-DQB2P05538 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQB2P05538 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 AC040169.1-201ENST00000565382 521 ntBASIC16.86■□□□□ 0.29
HLA-DQB2P05538 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 AP002472.1-201ENST00000577490 586 ntBASIC16.86■□□□□ 0.29
HLA-DQB2P05538 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQB2P05538 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQB2P05538 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms