Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFAP04085 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFAP04085 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFAP04085 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.65■□□□□ 0.1
PDGFAP04085 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFAP04085 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.64■□□□□ 0.09
PDGFAP04085 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 PCDHB19P-201ENST00000570871 2371 ntBASIC15.64■□□□□ 0.09
PDGFAP04085 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.64■□□□□ 0.09
PDGFAP04085 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.64■□□□□ 0.09
PDGFAP04085 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 KRT18P55-202ENST00000578578 1546 ntBASIC15.64■□□□□ 0.09
PDGFAP04085 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.64■□□□□ 0.09
PDGFAP04085 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
PDGFAP04085 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
PDGFAP04085 BASP1P1-201ENST00000430708 665 ntBASIC15.64■□□□□ 0.09
PDGFAP04085 SPCS2P4-201ENST00000436160 681 ntBASIC15.64■□□□□ 0.09
PDGFAP04085 KLF2P3-201ENST00000451977 1087 ntBASIC15.64■□□□□ 0.09
PDGFAP04085 RN7SL589P-201ENST00000481268 310 ntBASIC15.64■□□□□ 0.09
PDGFAP04085 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.64■□□□□ 0.09
PDGFAP04085 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
PDGFAP04085 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.64■□□□□ 0.09
PDGFAP04085 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.64■□□□□ 0.09
PDGFAP04085 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.64■□□□□ 0.09
PDGFAP04085 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.64■□□□□ 0.09
PDGFAP04085 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.64■□□□□ 0.09
PDGFAP04085 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 AP001059.3-201ENST00000619053 235 ntBASIC15.64■□□□□ 0.09
PDGFAP04085 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.64■□□□□ 0.09
PDGFAP04085 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PDGFAP04085 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.64■□□□□ 0.09
PDGFAP04085 AL136379.1-201ENST00000623471 2642 ntBASIC15.64■□□□□ 0.09
PDGFAP04085 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFAP04085 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PDGFAP04085 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
PDGFAP04085 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PDGFAP04085 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PDGFAP04085 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PDGFAP04085 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
PDGFAP04085 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.63■□□□□ 0.09
PDGFAP04085 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.63■□□□□ 0.09
PDGFAP04085 RBPMS2P1-201ENST00000437762 623 ntBASIC15.63■□□□□ 0.09
PDGFAP04085 TSPY16P-201ENST00000449843 468 ntBASIC15.63■□□□□ 0.09
PDGFAP04085 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.63■□□□□ 0.09
PDGFAP04085 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.63■□□□□ 0.09
PDGFAP04085 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.63■□□□□ 0.09
PDGFAP04085 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.63■□□□□ 0.09
PDGFAP04085 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.63■□□□□ 0.09
PDGFAP04085 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.63■□□□□ 0.09
PDGFAP04085 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.63■□□□□ 0.09
PDGFAP04085 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 RARRES2P8-201ENST00000566335 367 ntBASIC15.63■□□□□ 0.09
PDGFAP04085 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.63■□□□□ 0.09
PDGFAP04085 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.63■□□□□ 0.09
PDGFAP04085 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.63■□□□□ 0.09
PDGFAP04085 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.63■□□□□ 0.09
PDGFAP04085 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
PDGFAP04085 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.63■□□□□ 0.09
PDGFAP04085 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.63■□□□□ 0.09
PDGFAP04085 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.63■□□□□ 0.09
PDGFAP04085 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PDGFAP04085 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
PDGFAP04085 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PDGFAP04085 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFAP04085 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms