Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VTNP04004 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTNP04004 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.18■□□□□ 0.5
VTNP04004 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
VTNP04004 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.18■□□□□ 0.5
VTNP04004 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.18■□□□□ 0.5
VTNP04004 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.18■□□□□ 0.5
VTNP04004 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTNP04004 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.18■□□□□ 0.5
VTNP04004 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.18■□□□□ 0.5
VTNP04004 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VTNP04004 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.18■□□□□ 0.5
VTNP04004 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.18■□□□□ 0.5
VTNP04004 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VTNP04004 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTNP04004 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTNP04004 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.18■□□□□ 0.5
VTNP04004 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTNP04004 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTNP04004 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VTNP04004 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTNP04004 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTNP04004 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.18■□□□□ 0.5
VTNP04004 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VTNP04004 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VTNP04004 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.18■□□□□ 0.5
VTNP04004 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.17■□□□□ 0.5
VTNP04004 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
VTNP04004 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.17■□□□□ 0.5
VTNP04004 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.17■□□□□ 0.5
VTNP04004 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.17■□□□□ 0.5
VTNP04004 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
VTNP04004 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
VTNP04004 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.17■□□□□ 0.5
VTNP04004 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.17■□□□□ 0.5
VTNP04004 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
VTNP04004 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.17■□□□□ 0.5
VTNP04004 HLA-H-201ENST00000383620 1096 ntBASIC18.17■□□□□ 0.5
VTNP04004 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.17■□□□□ 0.5
VTNP04004 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.17■□□□□ 0.5
VTNP04004 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.17■□□□□ 0.5
VTNP04004 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.17■□□□□ 0.5
VTNP04004 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.17■□□□□ 0.5
VTNP04004 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.17■□□□□ 0.5
VTNP04004 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.17■□□□□ 0.5
VTNP04004 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
VTNP04004 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.17■□□□□ 0.5
VTNP04004 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.17■□□□□ 0.5
VTNP04004 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTNP04004 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.17■□□□□ 0.5
VTNP04004 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VTNP04004 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VTNP04004 AL031731.1-201ENST00000642131 2094 ntBASIC18.16■□□□□ 0.5
VTNP04004 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.16■□□□□ 0.5
VTNP04004 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VTNP04004 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VTNP04004 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VTNP04004 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VTNP04004 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VTNP04004 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VTNP04004 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VTNP04004 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
VTNP04004 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.16■□□□□ 0.5
VTNP04004 AL035633.1-201ENST00000406139 838 ntBASIC18.16■□□□□ 0.5
VTNP04004 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.16■□□□□ 0.5
VTNP04004 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.16■□□□□ 0.5
VTNP04004 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.16■□□□□ 0.5
VTNP04004 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.16■□□□□ 0.5
VTNP04004 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.16■□□□□ 0.5
VTNP04004 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.16■□□□□ 0.5
VTNP04004 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.16■□□□□ 0.5
VTNP04004 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.16■□□□□ 0.5
VTNP04004 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
VTNP04004 AC105020.1-201ENST00000435356 2205 ntBASIC18.16■□□□□ 0.5
VTNP04004 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VTNP04004 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.16■□□□□ 0.5
VTNP04004 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.16■□□□□ 0.5
VTNP04004 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VTNP04004 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VTNP04004 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VTNP04004 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.16■□□□□ 0.5
VTNP04004 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VTNP04004 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms