Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
APOA1P02647 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
APOA1P02647 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOA1P02647 CICP4-201ENST00000447359 2812 ntBASIC14.93□□□□□ -0.02
APOA1P02647 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOA1P02647 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.92□□□□□ -0.02
APOA1P02647 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.92□□□□□ -0.02
APOA1P02647 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
APOA1P02647 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
APOA1P02647 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
APOA1P02647 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.92□□□□□ -0.02
APOA1P02647 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
APOA1P02647 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
APOA1P02647 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.92□□□□□ -0.02
APOA1P02647 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.92□□□□□ -0.02
APOA1P02647 RPPH1-201ENST00000516869 333 ntBASIC14.92□□□□□ -0.02
APOA1P02647 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.92□□□□□ -0.02
APOA1P02647 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.92□□□□□ -0.02
APOA1P02647 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
APOA1P02647 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.92□□□□□ -0.02
APOA1P02647 AC006058.3-201ENST00000606217 1069 ntBASIC14.92□□□□□ -0.02
APOA1P02647 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
APOA1P02647 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.92□□□□□ -0.02
APOA1P02647 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
APOA1P02647 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.92□□□□□ -0.02
APOA1P02647 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
APOA1P02647 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
APOA1P02647 AL603832.2-201ENST00000566195 2125 ntBASIC14.92□□□□□ -0.02
APOA1P02647 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOA1P02647 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.92□□□□□ -0.02
APOA1P02647 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
APOA1P02647 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.92□□□□□ -0.02
APOA1P02647 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
APOA1P02647 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.91□□□□□ -0.02
APOA1P02647 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
APOA1P02647 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
APOA1P02647 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
APOA1P02647 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
APOA1P02647 AL391256.1-201ENST00000443260 1855 ntBASIC14.91□□□□□ -0.02
APOA1P02647 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
APOA1P02647 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
APOA1P02647 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.91□□□□□ -0.02
APOA1P02647 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
APOA1P02647 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.91□□□□□ -0.02
APOA1P02647 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
APOA1P02647 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.91□□□□□ -0.02
APOA1P02647 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.91□□□□□ -0.02
APOA1P02647 REXO1L10P-201ENST00000615707 1290 ntBASIC14.91□□□□□ -0.02
APOA1P02647 REXO1L12P-201ENST00000622156 912 ntBASIC14.91□□□□□ -0.02
APOA1P02647 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.91□□□□□ -0.02
APOA1P02647 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.91□□□□□ -0.02
APOA1P02647 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.91□□□□□ -0.02
APOA1P02647 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
APOA1P02647 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 ME2P1-201ENST00000426028 1970 ntBASIC14.91□□□□□ -0.02
APOA1P02647 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
APOA1P02647 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOA1P02647 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
APOA1P02647 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOA1P02647 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
APOA1P02647 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms