Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.62■□□□□ 0.41
ZBED1O96006 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZBED1O96006 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.62■□□□□ 0.41
ZBED1O96006 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ZBED1O96006 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.61■□□□□ 0.41
ZBED1O96006 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.61■□□□□ 0.41
ZBED1O96006 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ZBED1O96006 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.61■□□□□ 0.41
ZBED1O96006 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 AC078925.2-201ENST00000624013 1973 ntBASIC17.61■□□□□ 0.41
ZBED1O96006 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ZBED1O96006 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ZBED1O96006 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ZBED1O96006 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
ZBED1O96006 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ZBED1O96006 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ZBED1O96006 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.61■□□□□ 0.41
ZBED1O96006 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.61■□□□□ 0.41
ZBED1O96006 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.61■□□□□ 0.41
ZBED1O96006 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.61■□□□□ 0.41
ZBED1O96006 AC112482.1-201ENST00000492080 688 ntBASIC17.61■□□□□ 0.41
ZBED1O96006 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.61■□□□□ 0.41
ZBED1O96006 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.61■□□□□ 0.41
ZBED1O96006 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
ZBED1O96006 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
ZBED1O96006 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
ZBED1O96006 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.61■□□□□ 0.41
ZBED1O96006 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ZBED1O96006 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
ZBED1O96006 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.61■□□□□ 0.41
ZBED1O96006 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZBED1O96006 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.61■□□□□ 0.41
ZBED1O96006 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ZBED1O96006 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.6■□□□□ 0.41
ZBED1O96006 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.6■□□□□ 0.41
ZBED1O96006 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ZBED1O96006 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.6■□□□□ 0.41
ZBED1O96006 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.6■□□□□ 0.41
ZBED1O96006 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.6■□□□□ 0.41
ZBED1O96006 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.6■□□□□ 0.41
ZBED1O96006 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.6■□□□□ 0.41
ZBED1O96006 AC005829.1-201ENST00000570002 483 ntBASIC17.6■□□□□ 0.41
ZBED1O96006 AL078644.1-201ENST00000609881 752 ntBASIC17.6■□□□□ 0.41
ZBED1O96006 AC091812.2-201ENST00000619081 385 ntBASIC17.6■□□□□ 0.41
ZBED1O96006 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ZBED1O96006 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.6■□□□□ 0.41
ZBED1O96006 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.6■□□□□ 0.41
ZBED1O96006 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ZBED1O96006 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.6■□□□□ 0.41
ZBED1O96006 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.6■□□□□ 0.41
ZBED1O96006 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.6■□□□□ 0.41
ZBED1O96006 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZBED1O96006 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ZBED1O96006 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.59■□□□□ 0.41
ZBED1O96006 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZBED1O96006 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.59■□□□□ 0.41
ZBED1O96006 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.59■□□□□ 0.41
ZBED1O96006 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms