Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT33AO76009 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
KRT33AO76009 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT33AO76009 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT33AO76009 EGFEM1P-202ENST00000431685 1563 ntBASIC15.19■□□□□ 0.02
KRT33AO76009 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT33AO76009 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT33AO76009 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
KRT33AO76009 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT33AO76009 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
KRT33AO76009 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT33AO76009 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT33AO76009 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
KRT33AO76009 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT33AO76009 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT33AO76009 SLC25A6P4-201ENST00000586535 553 ntBASIC15.19■□□□□ 0.02
KRT33AO76009 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
KRT33AO76009 AL356488.2-201ENST00000602755 427 ntBASIC15.19■□□□□ 0.02
KRT33AO76009 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT33AO76009 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
KRT33AO76009 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT33AO76009 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
KRT33AO76009 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT33AO76009 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT33AO76009 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
KRT33AO76009 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 AC026691.1-201ENST00000602502 2017 ntBASIC15.19■□□□□ 0.02
KRT33AO76009 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
KRT33AO76009 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT33AO76009 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
KRT33AO76009 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT33AO76009 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT33AO76009 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
KRT33AO76009 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT33AO76009 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT33AO76009 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
KRT33AO76009 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 PI4KAP1-204ENST00000612579 1703 ntBASIC15.18■□□□□ 0.02
KRT33AO76009 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.18■□□□□ 0.02
KRT33AO76009 ELK2BP-201ENST00000415014 1224 ntBASIC15.18■□□□□ 0.02
KRT33AO76009 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.18■□□□□ 0.02
KRT33AO76009 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.18■□□□□ 0.02
KRT33AO76009 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.18■□□□□ 0.02
KRT33AO76009 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.18■□□□□ 0.02
KRT33AO76009 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.18■□□□□ 0.02
KRT33AO76009 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT33AO76009 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.18■□□□□ 0.02
KRT33AO76009 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.18■□□□□ 0.02
KRT33AO76009 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 AC006504.4-201ENST00000592118 1568 ntBASIC15.18■□□□□ 0.02
KRT33AO76009 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.18■□□□□ 0.02
KRT33AO76009 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT33AO76009 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
KRT33AO76009 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
KRT33AO76009 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
KRT33AO76009 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
KRT33AO76009 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT33AO76009 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT33AO76009 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT33AO76009 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KRT33AO76009 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT33AO76009 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT33AO76009 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT33AO76009 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
KRT33AO76009 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms