Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NDUFS3O75489 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.64■□□□□ 0.25
NDUFS3O75489 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
NDUFS3O75489 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.64■□□□□ 0.25
NDUFS3O75489 FAM185BP-201ENST00000443595 716 ntBASIC16.64■□□□□ 0.25
NDUFS3O75489 RNA5SP415-201ENST00000517246 115 ntBASIC16.64■□□□□ 0.25
NDUFS3O75489 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.64■□□□□ 0.25
NDUFS3O75489 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NDUFS3O75489 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.64■□□□□ 0.25
NDUFS3O75489 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.64■□□□□ 0.25
NDUFS3O75489 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.64■□□□□ 0.25
NDUFS3O75489 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
NDUFS3O75489 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NDUFS3O75489 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NDUFS3O75489 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.64■□□□□ 0.25
NDUFS3O75489 ALOX12P2-203ENST00000570921 1945 ntBASIC16.64■□□□□ 0.25
NDUFS3O75489 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.64■□□□□ 0.25
NDUFS3O75489 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.64■□□□□ 0.25
NDUFS3O75489 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.64■□□□□ 0.25
NDUFS3O75489 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NDUFS3O75489 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFS3O75489 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.64■□□□□ 0.25
NDUFS3O75489 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NDUFS3O75489 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.63■□□□□ 0.25
NDUFS3O75489 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.63■□□□□ 0.25
NDUFS3O75489 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
NDUFS3O75489 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.63■□□□□ 0.25
NDUFS3O75489 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 AL512652.2-201ENST00000625156 1716 ntBASIC16.63■□□□□ 0.25
NDUFS3O75489 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NDUFS3O75489 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.63■□□□□ 0.25
NDUFS3O75489 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.63■□□□□ 0.25
NDUFS3O75489 CRYGEP-201ENST00000412192 528 ntBASIC16.63■□□□□ 0.25
NDUFS3O75489 AC009947.1-201ENST00000444350 727 ntBASIC16.63■□□□□ 0.25
NDUFS3O75489 CXCL1P1-201ENST00000502804 216 ntBASIC16.63■□□□□ 0.25
NDUFS3O75489 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.63■□□□□ 0.25
NDUFS3O75489 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.63■□□□□ 0.25
NDUFS3O75489 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 AC012569.1-201ENST00000591191 1524 ntBASIC16.63■□□□□ 0.25
NDUFS3O75489 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.63■□□□□ 0.25
NDUFS3O75489 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.63■□□□□ 0.25
NDUFS3O75489 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NDUFS3O75489 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.63■□□□□ 0.25
NDUFS3O75489 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
NDUFS3O75489 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFS3O75489 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFS3O75489 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFS3O75489 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFS3O75489 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFS3O75489 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFS3O75489 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.62■□□□□ 0.25
NDUFS3O75489 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NDUFS3O75489 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.62■□□□□ 0.25
NDUFS3O75489 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFS3O75489 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFS3O75489 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NDUFS3O75489 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFS3O75489 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NDUFS3O75489 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NDUFS3O75489 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFS3O75489 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.62■□□□□ 0.25
NDUFS3O75489 VN2R19P-201ENST00000442399 1052 ntBASIC16.62■□□□□ 0.25
NDUFS3O75489 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFS3O75489 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms