Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AC073869.1-201ENST00000415574 2762 ntBASIC14.88□□□□□ -0.03
PFDN1O60925 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.88□□□□□ -0.03
PFDN1O60925 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
PFDN1O60925 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.88□□□□□ -0.03
PFDN1O60925 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.88□□□□□ -0.03
PFDN1O60925 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.88□□□□□ -0.03
PFDN1O60925 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.88□□□□□ -0.03
PFDN1O60925 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.88□□□□□ -0.03
PFDN1O60925 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 TMBIM7P-203ENST00000641617 1718 ntBASIC14.88□□□□□ -0.03
PFDN1O60925 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.88□□□□□ -0.03
PFDN1O60925 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PFDN1O60925 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.88□□□□□ -0.03
PFDN1O60925 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.88□□□□□ -0.03
PFDN1O60925 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.88□□□□□ -0.03
PFDN1O60925 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.88□□□□□ -0.03
PFDN1O60925 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.88□□□□□ -0.03
PFDN1O60925 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.88□□□□□ -0.03
PFDN1O60925 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.87□□□□□ -0.03
PFDN1O60925 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PFDN1O60925 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
PFDN1O60925 AC013726.1-201ENST00000563747 2285 ntBASIC14.87□□□□□ -0.03
PFDN1O60925 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
PFDN1O60925 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.87□□□□□ -0.03
PFDN1O60925 AC009949.1-201ENST00000623048 1830 ntBASIC14.87□□□□□ -0.03
PFDN1O60925 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PFDN1O60925 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 RARRES2P4-201ENST00000514074 484 ntBASIC14.87□□□□□ -0.03
PFDN1O60925 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.87□□□□□ -0.03
PFDN1O60925 UBE2DNL-204ENST00000602536 740 ntBASIC14.87□□□□□ -0.03
PFDN1O60925 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
PFDN1O60925 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PFDN1O60925 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 AC009102.3-201ENST00000623118 1491 ntBASIC14.87□□□□□ -0.03
PFDN1O60925 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.87□□□□□ -0.03
PFDN1O60925 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PFDN1O60925 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PFDN1O60925 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
PFDN1O60925 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PFDN1O60925 MBLAC2-202ENST00000514906 1936 ntBASIC14.86□□□□□ -0.03
PFDN1O60925 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PFDN1O60925 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.86□□□□□ -0.03
PFDN1O60925 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PFDN1O60925 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.86□□□□□ -0.03
PFDN1O60925 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PFDN1O60925 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PFDN1O60925 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.86□□□□□ -0.03
PFDN1O60925 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PFDN1O60925 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PFDN1O60925 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms