Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTNND1O60716 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.37■□□□□ 0.69
CTNND1O60716 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNND1O60716 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNND1O60716 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNND1O60716 AC012313.1-201ENST00000593393 3059 ntBASIC19.37■□□□□ 0.69
CTNND1O60716 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CTNND1O60716 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.37■□□□□ 0.69
CTNND1O60716 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNND1O60716 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNND1O60716 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNND1O60716 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNND1O60716 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CTNND1O60716 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTNND1O60716 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNND1O60716 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CTNND1O60716 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNND1O60716 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CTNND1O60716 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNND1O60716 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CTNND1O60716 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.36■□□□□ 0.69
CTNND1O60716 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNND1O60716 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTNND1O60716 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNND1O60716 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNND1O60716 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNND1O60716 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTNND1O60716 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNND1O60716 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNND1O60716 COX5BP8-201ENST00000416911 349 ntBASIC19.36■□□□□ 0.69
CTNND1O60716 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.36■□□□□ 0.69
CTNND1O60716 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNND1O60716 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.36■□□□□ 0.69
CTNND1O60716 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.36■□□□□ 0.69
CTNND1O60716 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNND1O60716 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.36■□□□□ 0.69
CTNND1O60716 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNND1O60716 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CTNND1O60716 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNND1O60716 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CTNND1O60716 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNND1O60716 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CTNND1O60716 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CTNND1O60716 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CTNND1O60716 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CTNND1O60716 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNND1O60716 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CTNND1O60716 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTNND1O60716 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNND1O60716 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNND1O60716 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNND1O60716 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.35■□□□□ 0.69
CTNND1O60716 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.35■□□□□ 0.69
CTNND1O60716 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.35■□□□□ 0.69
CTNND1O60716 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTNND1O60716 AL079307.3-201ENST00000556114 283 ntBASIC19.35■□□□□ 0.69
CTNND1O60716 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.35■□□□□ 0.69
CTNND1O60716 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.35■□□□□ 0.69
CTNND1O60716 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.35■□□□□ 0.69
CTNND1O60716 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNND1O60716 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.35■□□□□ 0.69
CTNND1O60716 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNND1O60716 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNND1O60716 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.35■□□□□ 0.69
CTNND1O60716 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CTNND1O60716 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNND1O60716 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTNND1O60716 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNND1O60716 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.34■□□□□ 0.69
CTNND1O60716 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNND1O60716 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CTNND1O60716 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.34■□□□□ 0.69
CTNND1O60716 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNND1O60716 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNND1O60716 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNND1O60716 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNND1O60716 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.34■□□□□ 0.69
CTNND1O60716 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNND1O60716 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CTNND1O60716 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CTNND1O60716 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNND1O60716 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.34■□□□□ 0.69
CTNND1O60716 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.34■□□□□ 0.69
CTNND1O60716 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNND1O60716 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNND1O60716 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CTNND1O60716 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.34■□□□□ 0.69
CTNND1O60716 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CTNND1O60716 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNND1O60716 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNND1O60716 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNND1O60716 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.33■□□□□ 0.69
CTNND1O60716 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.33■□□□□ 0.69
CTNND1O60716 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CTNND1O60716 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.33■□□□□ 0.69
CTNND1O60716 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.33■□□□□ 0.69
CTNND1O60716 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNND1O60716 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CTNND1O60716 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNND1O60716 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms