Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.16■□□□□ 0.34
TSPAN3O60637 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.16■□□□□ 0.34
TSPAN3O60637 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.16■□□□□ 0.34
TSPAN3O60637 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.16■□□□□ 0.34
TSPAN3O60637 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 AC109322.1-201ENST00000524499 1264 ntBASIC17.16■□□□□ 0.34
TSPAN3O60637 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.16■□□□□ 0.34
TSPAN3O60637 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.16■□□□□ 0.34
TSPAN3O60637 AL138918.1-201ENST00000568306 659 ntBASIC17.16■□□□□ 0.34
TSPAN3O60637 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
TSPAN3O60637 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.16■□□□□ 0.34
TSPAN3O60637 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 AC106028.4-201ENST00000614509 607 ntBASIC17.16■□□□□ 0.34
TSPAN3O60637 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.16■□□□□ 0.34
TSPAN3O60637 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TSPAN3O60637 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.16■□□□□ 0.34
TSPAN3O60637 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.16■□□□□ 0.34
TSPAN3O60637 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.16■□□□□ 0.34
TSPAN3O60637 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.16■□□□□ 0.34
TSPAN3O60637 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 AC105020.1-201ENST00000435356 2205 ntBASIC17.16■□□□□ 0.34
TSPAN3O60637 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.16■□□□□ 0.34
TSPAN3O60637 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TSPAN3O60637 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TSPAN3O60637 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
TSPAN3O60637 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
TSPAN3O60637 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.15■□□□□ 0.34
TSPAN3O60637 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.15■□□□□ 0.34
TSPAN3O60637 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.15■□□□□ 0.34
TSPAN3O60637 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.15■□□□□ 0.34
TSPAN3O60637 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.15■□□□□ 0.34
TSPAN3O60637 KRT18P32-201ENST00000424695 1287 ntBASIC17.15■□□□□ 0.34
TSPAN3O60637 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.15■□□□□ 0.34
TSPAN3O60637 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.15■□□□□ 0.34
TSPAN3O60637 RFPL4AP1-201ENST00000530883 850 ntBASIC17.15■□□□□ 0.34
TSPAN3O60637 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.15■□□□□ 0.34
TSPAN3O60637 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.15■□□□□ 0.34
TSPAN3O60637 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.15■□□□□ 0.34
TSPAN3O60637 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.15■□□□□ 0.34
TSPAN3O60637 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.15■□□□□ 0.34
TSPAN3O60637 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TSPAN3O60637 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.15■□□□□ 0.34
TSPAN3O60637 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TSPAN3O60637 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TSPAN3O60637 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TSPAN3O60637 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TSPAN3O60637 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TSPAN3O60637 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.34
TSPAN3O60637 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN3O60637 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN3O60637 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN3O60637 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TSPAN3O60637 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.14■□□□□ 0.33
TSPAN3O60637 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN3O60637 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TSPAN3O60637 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN3O60637 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN3O60637 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN3O60637 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN3O60637 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN3O60637 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TSPAN3O60637 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TSPAN3O60637 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN3O60637 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.14■□□□□ 0.33
TSPAN3O60637 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN3O60637 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TSPAN3O60637 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.14■□□□□ 0.33
TSPAN3O60637 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.14■□□□□ 0.33
TSPAN3O60637 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN3O60637 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.14■□□□□ 0.33
TSPAN3O60637 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN3O60637 AC027307.2-201ENST00000591252 911 ntBASIC17.14■□□□□ 0.33
TSPAN3O60637 LINC00628-201ENST00000628516 1289 ntBASIC17.14■□□□□ 0.33
TSPAN3O60637 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.14■□□□□ 0.33
TSPAN3O60637 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TSPAN3O60637 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TSPAN3O60637 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.14■□□□□ 0.33
TSPAN3O60637 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.14■□□□□ 0.33
TSPAN3O60637 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.14■□□□□ 0.33
TSPAN3O60637 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms