Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CHMP2AO43633 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP2AO43633 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.73■□□□□ 0.59
CHMP2AO43633 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CHMP2AO43633 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP2AO43633 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP2AO43633 AC021097.1-201ENST00000607902 574 ntBASIC18.73■□□□□ 0.59
CHMP2AO43633 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CHMP2AO43633 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.73■□□□□ 0.59
CHMP2AO43633 AL513210.1-201ENST00000629608 234 ntBASIC18.73■□□□□ 0.59
CHMP2AO43633 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.73■□□□□ 0.59
CHMP2AO43633 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP2AO43633 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CHMP2AO43633 AC092171.3-201ENST00000610122 2651 ntBASIC18.73■□□□□ 0.59
CHMP2AO43633 WASH6P-202ENST00000359512 1437 ntBASIC18.73■□□□□ 0.59
CHMP2AO43633 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CHMP2AO43633 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2AO43633 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP2AO43633 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHMP2AO43633 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP2AO43633 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2AO43633 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2AO43633 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2AO43633 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2AO43633 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2AO43633 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CHMP2AO43633 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2AO43633 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2AO43633 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2AO43633 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CHMP2AO43633 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP2AO43633 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP2AO43633 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP2AO43633 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.72■□□□□ 0.59
CHMP2AO43633 AC092183.1-201ENST00000469884 875 ntBASIC18.72■□□□□ 0.59
CHMP2AO43633 AC079140.1-201ENST00000508039 487 ntBASIC18.72■□□□□ 0.59
CHMP2AO43633 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2AO43633 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHMP2AO43633 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP2AO43633 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP2AO43633 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2AO43633 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CHMP2AO43633 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2AO43633 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CHMP2AO43633 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2AO43633 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2AO43633 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.71■□□□□ 0.59
CHMP2AO43633 AL512652.2-201ENST00000625156 1716 ntBASIC18.71■□□□□ 0.59
CHMP2AO43633 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHMP2AO43633 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2AO43633 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2AO43633 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHMP2AO43633 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2AO43633 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2AO43633 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2AO43633 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2AO43633 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2AO43633 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHMP2AO43633 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2AO43633 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP2AO43633 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2AO43633 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHMP2AO43633 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP2AO43633 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP2AO43633 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP2AO43633 AP000344.2-201ENST00000512987 629 ntBASIC18.71■□□□□ 0.59
CHMP2AO43633 FAM86C2P-203ENST00000528684 1004 ntBASIC18.71■□□□□ 0.59
CHMP2AO43633 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP2AO43633 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.71■□□□□ 0.59
CHMP2AO43633 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CHMP2AO43633 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP2AO43633 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.71■□□□□ 0.59
CHMP2AO43633 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHMP2AO43633 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.71■□□□□ 0.59
CHMP2AO43633 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.71■□□□□ 0.59
CHMP2AO43633 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2AO43633 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
CHMP2AO43633 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2AO43633 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2AO43633 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2AO43633 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP2AO43633 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2AO43633 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.71■□□□□ 0.59
CHMP2AO43633 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
CHMP2AO43633 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2AO43633 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2AO43633 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2AO43633 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2AO43633 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2AO43633 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2AO43633 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2AO43633 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
CHMP2AO43633 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2AO43633 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms