Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCHNA4D1U4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LCHNA4D1U4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCHNA4D1U4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.75■□□□□ 0.43
LCHNA4D1U4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LCHNA4D1U4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LCHNA4D1U4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LCHNA4D1U4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LCHNA4D1U4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LCHNA4D1U4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
LCHNA4D1U4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LCHNA4D1U4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LCHNA4D1U4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LCHNA4D1U4 AC098859.1-201ENST00000502915 1238 ntBASIC17.74■□□□□ 0.43
LCHNA4D1U4 AC119751.2-201ENST00000504529 210 ntBASIC17.74■□□□□ 0.43
LCHNA4D1U4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LCHNA4D1U4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 SLC7A15P-201ENST00000424028 1363 ntBASIC17.74■□□□□ 0.43
LCHNA4D1U4 AL021920.2-201ENST00000624828 1351 ntBASIC17.74■□□□□ 0.43
LCHNA4D1U4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LCHNA4D1U4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LCHNA4D1U4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LCHNA4D1U4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.74■□□□□ 0.43
LCHNA4D1U4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LCHNA4D1U4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LCHNA4D1U4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LCHNA4D1U4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LCHNA4D1U4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LCHNA4D1U4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LCHNA4D1U4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LCHNA4D1U4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LCHNA4D1U4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LCHNA4D1U4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 TTTY23B-201ENST00000442790 549 ntBASIC17.73■□□□□ 0.43
LCHNA4D1U4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LCHNA4D1U4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LCHNA4D1U4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 AL512343.1-201ENST00000605837 169 ntBASIC17.73■□□□□ 0.43
LCHNA4D1U4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LCHNA4D1U4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LCHNA4D1U4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LCHNA4D1U4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LCHNA4D1U4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LCHNA4D1U4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LCHNA4D1U4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LCHNA4D1U4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LCHNA4D1U4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LCHNA4D1U4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LCHNA4D1U4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 AC092552.1-201ENST00000547243 906 ntBASIC17.72■□□□□ 0.43
LCHNA4D1U4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 CTBP2P3-201ENST00000585629 1255 ntBASIC17.72■□□□□ 0.43
LCHNA4D1U4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LCHNA4D1U4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.72■□□□□ 0.43
LCHNA4D1U4 AL671710.1-201ENST00000610245 2349 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms