Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 AP002490.2-201ENST00000524791 560 ntBASIC16.95■□□□□ 0.3
CCDC78A2IDD5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 AC104692.2-201ENST00000603054 253 ntBASIC16.95■□□□□ 0.3
CCDC78A2IDD5 MIR7706-201ENST00000613747 67 ntBASIC16.95■□□□□ 0.3
CCDC78A2IDD5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC78A2IDD5 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 AC117500.6-201ENST00000624871 588 ntBASIC16.94■□□□□ 0.3
CCDC78A2IDD5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 AC006277.1-201ENST00000624348 1610 ntBASIC16.94■□□□□ 0.3
CCDC78A2IDD5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC78A2IDD5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 TOP3BP1-201ENST00000420768 1380 ntBASIC16.93■□□□□ 0.3
CCDC78A2IDD5 LINC00895-201ENST00000629028 1637 ntBASIC16.93■□□□□ 0.3
CCDC78A2IDD5 DOC2GP-204ENST00000639052 2548 ntBASIC16.93■□□□□ 0.3
CCDC78A2IDD5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 PMS2P1-201ENST00000431037 1228 ntBASIC16.93■□□□□ 0.3
CCDC78A2IDD5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 AL160237.2-201ENST00000556165 472 ntBASIC16.93■□□□□ 0.3
CCDC78A2IDD5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 REXO1L3P-201ENST00000622202 1288 ntBASIC16.93■□□□□ 0.3
CCDC78A2IDD5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC78A2IDD5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms