Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV18A0A075B6X5 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 AC011840.4-201ENST00000578471 627 ntBASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 AC073592.5-201ENST00000624854 528 ntBASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV18A0A075B6X5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 GGT4P-201ENST00000623672 1708 ntBASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 AC112907.2-201ENST00000448639 330 ntBASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 KRT18P38-201ENST00000449496 1282 ntBASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 RN7SL606P-201ENST00000472779 293 ntBASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 AC145285.6-201ENST00000604632 637 ntBASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 AL353801.3-201ENST00000609898 542 ntBASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV18A0A075B6X5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms