Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 AC002056.1-201ENST00000395613 760 ntBASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 AC011467.4-201ENST00000594891 528 ntBASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 AC092364.2-202ENST00000597012 1073 ntBASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 AL139327.4-201ENST00000612362 153 ntBASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 AL138688.1-201ENST00000624851 1594 ntBASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA3Q9Y5H0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 FAM8A3P-201ENST00000427218 844 ntBASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 ADH5P3-201ENST00000433842 1137 ntBASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 AC087163.2-201ENST00000457299 853 ntBASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 SLC25A6P2-201ENST00000497974 877 ntBASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 AC025678.2-201ENST00000562061 970 ntBASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 AC004449.1-201ENST00000564240 433 ntBASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA3Q9Y5H0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA3Q9Y5H0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA3Q9Y5H0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PCDHGA3Q9Y5H0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDHGA3Q9Y5H0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA3Q9Y5H0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA3Q9Y5H0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PCDHGA3Q9Y5H0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDHGA3Q9Y5H0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA3Q9Y5H0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA3Q9Y5H0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms