Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 ACTL9-202ENST00000612068 1252 ntBASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 AC129492.6-201ENST00000611383 1305 ntBASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA6Q9Y5G7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 NFIC-211ENST00000641145 8399 ntBASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 TSEN15P1-201ENST00000423257 515 ntBASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 AL139327.4-201ENST00000612362 153 ntBASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 AC105339.1-204ENST00000636249 355 ntBASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA6Q9Y5G7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms