Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 GPS2P2-201ENST00000430745 888 ntBASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 FAM86GP-201ENST00000448322 971 ntBASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 KRT8P23-201ENST00000560090 1207 ntBASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 Z92544.3-201ENST00000624747 417 ntBASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDHB2Q9Y5E7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDHB2Q9Y5E7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 AC016027.1-202ENST00000607927 1699 ntBASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 PCDHB17P-201ENST00000539533 2393 ntBASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB2Q9Y5E7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB2Q9Y5E7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms