Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
R3HCC1Q9Y3T6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HCC1Q9Y3T6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
R3HCC1Q9Y3T6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC19.2■□□□□ 0.66
R3HCC1Q9Y3T6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC19.2■□□□□ 0.66
R3HCC1Q9Y3T6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 KRT16P4-201ENST00000453883 522 ntBASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 AC005336.2-201ENST00000593183 939 ntBASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 AL138831.2-201ENST00000606564 490 ntBASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 KRT8P47-201ENST00000604727 1398 ntBASIC19.19■□□□□ 0.66
R3HCC1Q9Y3T6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 AC046185.3-201ENST00000623228 1824 ntBASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 TP73-AS1-210ENST00000637775 1455 ntBASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC19.18■□□□□ 0.66
R3HCC1Q9Y3T6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
R3HCC1Q9Y3T6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
R3HCC1Q9Y3T6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
R3HCC1Q9Y3T6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
R3HCC1Q9Y3T6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
R3HCC1Q9Y3T6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
R3HCC1Q9Y3T6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
R3HCC1Q9Y3T6 NORAD-201ENST00000565493 5339 ntBASIC19.17■□□□□ 0.66
R3HCC1Q9Y3T6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms