Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 AC009949.1-201ENST00000623048 1830 ntBASIC15.84■□□□□ 0.13
LHX6Q9UPM6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 AC103810.3-201ENST00000583567 96 ntBASIC15.84■□□□□ 0.13
LHX6Q9UPM6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 NOC2LP2-201ENST00000407594 1944 ntBASIC15.84■□□□□ 0.13
LHX6Q9UPM6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
LHX6Q9UPM6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LHX6Q9UPM6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.83■□□□□ 0.13
LHX6Q9UPM6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.83■□□□□ 0.13
LHX6Q9UPM6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
LHX6Q9UPM6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.83■□□□□ 0.13
LHX6Q9UPM6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 AC013470.3-201ENST00000420252 1194 ntBASIC15.83■□□□□ 0.12
LHX6Q9UPM6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 AC119751.2-201ENST00000504529 210 ntBASIC15.83■□□□□ 0.12
LHX6Q9UPM6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 AC005014.3-201ENST00000605985 190 ntBASIC15.83■□□□□ 0.12
LHX6Q9UPM6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.83■□□□□ 0.12
LHX6Q9UPM6 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.83■□□□□ 0.12
LHX6Q9UPM6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 AC093677.2-201ENST00000600169 1863 ntBASIC15.82■□□□□ 0.12
LHX6Q9UPM6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms