Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 DOC2GP-204ENST00000639052 2548 ntBASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 KRT18P2-201ENST00000447938 1258 ntBASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 MPDU1-223ENST00000582151 728 ntBASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 AC010507.1-201ENST00000633895 436 ntBASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PPARGC1AQ9UBK2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 AC008741.2-201ENST00000612792 3115 ntBASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 FLJ38576-201ENST00000623820 2459 ntBASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPARGC1AQ9UBK2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 LINC00895-201ENST00000629028 1637 ntBASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 HCG4-201ENST00000418983 998 ntBASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.4■□□□□ 0.38
PPARGC1AQ9UBK2 AC013467.2-201ENST00000605472 835 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms