Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 AL645939.2-201ENST00000427340 991 ntBASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 AL355385.1-201ENST00000606123 409 ntBASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 LINC00628-201ENST00000628516 1289 ntBASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 AC084121.4-201ENST00000641598 221 ntBASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 AF228730.8-201ENST00000642140 221 ntBASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20BQ9P0W2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 AC084018.2-201ENST00000613093 2607 ntBASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 KRT8P39-201ENST00000396270 1433 ntBASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20BQ9P0W2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 KRT18P32-201ENST00000424695 1287 ntBASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 CYMP-203ENST00000474680 1263 ntBASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.23■□□□□ 0.83
HMG20BQ9P0W2 KRT8P23-201ENST00000560090 1207 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms