Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 MIR4745-201ENST00000577608 62 ntBASIC19.97■□□□□ 0.79
SALL1Q9NSC2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 SPTSSB-204ENST00000617024 1292 ntBASIC19.97■□□□□ 0.79
SALL1Q9NSC2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 AC098859.1-201ENST00000502915 1238 ntBASIC19.96■□□□□ 0.79
SALL1Q9NSC2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL1Q9NSC2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 INGX-202ENST00000489074 768 ntBASIC19.95■□□□□ 0.78
SALL1Q9NSC2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.95■□□□□ 0.78
SALL1Q9NSC2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.94■□□□□ 0.78
SALL1Q9NSC2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms