Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 AC135983.4-201ENST00000564116 1262 ntBASIC15.23■□□□□ 0.03
CHD8Q9HCK8 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 AP001527.2-201ENST00000614441 631 ntBASIC15.23■□□□□ 0.03
CHD8Q9HCK8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 AC011491.1-203ENST00000637688 543 ntBASIC15.23■□□□□ 0.03
CHD8Q9HCK8 AL139011.1-202ENST00000642063 584 ntBASIC15.23■□□□□ 0.03
CHD8Q9HCK8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 AC006480.2-201ENST00000609770 1337 ntBASIC15.22■□□□□ 0.03
CHD8Q9HCK8 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 AC125604.1-201ENST00000496255 707 ntBASIC15.22■□□□□ 0.03
CHD8Q9HCK8 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 AC124283.3-201ENST00000570869 594 ntBASIC15.22■□□□□ 0.03
CHD8Q9HCK8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 AL671710.1-201ENST00000610245 2349 ntBASIC15.22■□□□□ 0.03
CHD8Q9HCK8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD8Q9HCK8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.21■□□□□ 0.03
CHD8Q9HCK8 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 AC012441.1-201ENST00000446669 685 ntBASIC15.21■□□□□ 0.03
CHD8Q9HCK8 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 FTLP5-201ENST00000586853 534 ntBASIC15.21■□□□□ 0.03
CHD8Q9HCK8 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 COX6A1P2-201ENST00000620597 330 ntBASIC15.21■□□□□ 0.03
CHD8Q9HCK8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD8Q9HCK8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHD8Q9HCK8 AL512430.1-201ENST00000392575 860 ntBASIC15.21■□□□□ 0.02
CHD8Q9HCK8 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.21■□□□□ 0.02
CHD8Q9HCK8 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.21■□□□□ 0.02
CHD8Q9HCK8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.21■□□□□ 0.02
CHD8Q9HCK8 AP000346.4-201ENST00000614827 381 ntBASIC15.21■□□□□ 0.02
CHD8Q9HCK8 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.21■□□□□ 0.02
CHD8Q9HCK8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.21■□□□□ 0.02
CHD8Q9HCK8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
CHD8Q9HCK8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms